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Aggregate data from AMRfinder This is a thin wrapper around BascetAggregateMap

Source: R/ext_tools.R
BascetAggregateAMRfinder.Rd

Aggregate data from AMRfinder This is a thin wrapper around BascetAggregateMap

Usage

BascetAggregateAMRfinder(
  bascetRoot,
  inputName = "AMRfinder",
  include_cells = NULL,
  get_column = "Element.symbol",
  runner = GetDefaultBascetRunner(),
  bascet_instance = GetDefaultBascetInstance()
)