Compute minhashes for each cell. This is a thin wrapper around BascetMapCell

Compute minhashes for each cell. This is a thin wrapper around BascetMapCell

Usage

BascetComputeMinhash(
  bascetRoot,
  inputName = "filtered",
  outputName = "minhash",
  overwrite = FALSE,
  max_reads = 1e+05,
  kmer_size = 31,
  runner = GetDefaultBascetRunner(),
  bascet_instance = GetDefaultBascetInstance()
)

Arguments

bascetRoot

The root folder where all Bascets are stored

runner

The job manager, specifying how the command will be run (e.g. locally, or via SLURM)

bascet_instance

Configuration for how to run the Bascet Rust API

Value

TODO