Build count table from kmer table and a list of selected kmers — BascetQueryKMC • Zorn

Build count table from kmer table and a list of selected kmers

Usage

BascetQueryKMC(
  bascetRoot,
  inputName = "kmc",
  outputName = "kmer",
  useKMERs,
  overwrite = FALSE,
  runner = GetDefaultBascetRunner(),
  bascet_instance = GetDefaultBascetInstance()
)

Arguments

bascetRoot: The root folder where all Bascets are stored
useKMERs: description
runner: The job manager, specifying how the command will be run (e.g. locally, or via SLURM)
bascet_instance: Configuration for how to run the Bascet Rust API

Value

TODO