Take a KRAKEN2 count matrix where the column is the taxonomyID. Convert to a matrix where the columns instead are the names of each taxonomy. Unused taxonomyID columns will not be kept — SetTaxonomyNamesFeatures • Zorn

Take a KRAKEN2 count matrix where the column is the taxonomyID. Convert to a matrix where the columns instead are the names of each taxonomy. Unused taxonomyID columns will not be kept

Usage

SetTaxonomyNamesFeatures(mat, keep_species_only = TRUE)

Arguments

mat: description
keep_species_only: description

Value

A named count matrix